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    LOC4344331 protein ETHYLENE-INSENSITIVE 3-like 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344331, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4344331
    Gene description
    protein ETHYLENE-INSENSITIVE 3-like 2
    Locus tag
    OSNPB_070685700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsEIL2; OJ1200_C08.104
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    Genomic context

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    See LOC4344331 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (29349894..29352504, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (29115978..29118702, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene probable lysophospholipase BODYGUARD 4 Neighboring gene uncharacterized LOC112939602 Neighboring gene U2 spliceosomal RNA Neighboring gene short-chain dehydrogenase/reductase 2b Neighboring gene subtilisin-like protease

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice. Yang C, et al. Plant Physiol, 2015 Sep. PMID 25995326, Free PMC Article
    2. Involvement of two rice ETHYLENE INSENSITIVE3-LIKE genes in wound signaling. Hiraga S, et al. Mol Genet Genomics, 2009 Nov. PMID 19798512
    3. GRASSIUS: a platform for comparative regulatory genomics across the grasses. Yilmaz A, et al. Plant Physiol, 2009 Jan. PMID 18987217, Free PMC Article
    4. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Our study provides insights for the functional diversification of MHZ6/OsEIL1 and OsEIL2 in ethylene response and finds a novel mode of ethylene-regulated salt stress response that could be helpful for engineering salt-tolerant crops.
      Title: MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ETHYLENE-INSENSITIVE 3-like 2
    Names
    EIL transcription factor
    Os07g0685700
    ethylene-insensitive-3-like protein
    putative transcription factor OsEIL2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      29349894..29352504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015791088.3 → XP_015646574.1  protein ETHYLENE-INSENSITIVE 3-like 2

      UniProtKB/Swiss-Prot
      Q8LIH6, Q8W3L9
      UniProtKB/TrEMBL
      B8B649
      Conserved Domains (1) summary
      pfam04873
      Location:85 → 338
      EIN3; Ethylene insensitive 3
    Nucleotide Protein
    Heading Accession and Version

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