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    LOC4344338 calmodulin-binding protein 25 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344338, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4344338
    Gene description
    calmodulin-binding protein 25
    Locus tag
    OSNPB_070686600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1150_E04.113; OJ1200_C08.117
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    Genomic context

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    See LOC4344338 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (29404895..29406054)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (29171065..29172227)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4344336 Neighboring gene nitrate regulatory gene2 protein Neighboring gene RINT1-like protein MAG2L Neighboring gene probable serine/threonine-protein kinase PBL2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to osmotic stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calmodulin-binding protein 25
    Names
    Os07g0686600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      29404895..29406054
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015790269.3 → XP_015645755.1  calmodulin-binding protein 25

      UniProtKB/TrEMBL
      A0A0P0XA97, A2YQ31, A3BNK2, Q8LIG8
      Conserved Domains (1) summary
      pfam05678
      Location:120 → 147
      VQ; VQ motif
    Nucleotide Protein
    Heading Accession and Version

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