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    LOC4325762 probable calcium-binding protein CML10 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325762, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4325762
    Gene description
    probable calcium-binding protein CML10
    Locus tag
    OSNPB_010949500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    CML10; OsJ_04761
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    Genomic context

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    See LOC4325762 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (42478135..42479192, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (41826109..41827172, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene probable calcium-binding protein CML23 Neighboring gene phytochromobilin:ferredoxin oxidoreductase, chloroplastic Neighboring gene probable glutathione S-transferase Neighboring gene probable glutathione S-transferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable calcium-binding protein CML10
    Names
    B1147A04.18
    Calmodulin-like protein 10
    LOC_Os01g72100
    putative pollen allergen Jun o 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001401490.1 → NP_001388419.1  probable calcium-binding protein CML10

      Status: VALIDATED

      Source sequence(s)
      AK104159, CI107694, CI692148
      UniProtKB/Swiss-Prot
      B7EI86, Q8RZB5
      UniProtKB/TrEMBL
      B8A960

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      42478135..42479192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RZB5.1 GenPept UniProtKB/Swiss-Prot:Q8RZB5

    Gene LinkOut

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