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    LOC4326736 SMR domain-containing protein At5g58720 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326736, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4326736
    Gene description
    SMR domain-containing protein At5g58720
    Locus tag
    OSNPB_010225100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4326736 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (6899802..6906835)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (6889337..6896391)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene indole-3-pyruvate monooxygenase YUCCA4-like Neighboring gene mitochondrial arginine transporter BAC2 Neighboring gene uncharacterized LOC9266550 Neighboring gene uncharacterized LOC4326738

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    SMR domain-containing protein At5g58720
    Names
    Os01g0225100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      6899802..6906835
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015765954.3 → XP_015621440.1  SMR domain-containing protein At5g58720

      UniProtKB/TrEMBL
      B9EU66
      Conserved Domains (3) summary
      pfam08590
      Location:426 → 487
      DUF1771; Domain of unknown function (DUF1771)
      cl02619
      Location:495 → 566
      Smr; Smr domain
      cl21463
      Location:231 → 273
      UBA_like_SF; UBA domain-like superfamily
    Nucleotide Protein
    Heading Accession and Version

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