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    LOC4331090 phosphate transporter PHO1-2-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331090, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4331090
    Gene description
    phosphate transporter PHO1-2-like
    Locus tag
    OSNPB_020809800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    PHO1-2; OsPHO1;2; OsJ_08812; OJ1112_G06.31; OJ1520_C09.43
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    Genomic context

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    See LOC4331090 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (35106025..35111752)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (34609413..34615052)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355474 Neighboring gene uncharacterized LOC4331088 Neighboring gene KIN14B-interacting protein At4g14310 Neighboring gene uncharacterized LOC107276732 Neighboring gene kinesin-like protein KIN-10A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A rice cis-natural antisense RNA acts as a translational enhancer for its cognate mRNA and contributes to phosphate homeostasis and plant fitness. Jabnoune M, et al. Plant Cell, 2013 Oct. PMID 24096344, Free PMC Article
    2. Node-Localized Transporters of Phosphorus Essential for Seed Development in Rice. Che J, et al. Plant Cell Physiol, 2020 Aug 1. PMID 32484878
    3. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Node-Localized Transporters of Phosphorus Essential for Seed Development in Rice.
      Title: Node-Localized Transporters of Phosphorus Essential for Seed Development in Rice.
    2. A cis-natural antisense RNA positively regulates the level of PHO1;2, a gene involved in phosphate loading into the xylem in rice.
      Title: A rice cis-natural antisense RNA acts as a translational enhancer for its cognate mRNA and contributes to phosphate homeostasis and plant fitness.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphate transporter PHO1-2
    Names
    LOC_Os02g56510
    Protein PHO1-2
    phosphate transporter 1;2
    putative phosphate transporter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417038.1 → NP_001403967.1  phosphate transporter PHO1-2

      Status: VALIDATED

      Source sequence(s)
      AK100323, CI194658, CI236479, CI352871, CV721183
      UniProtKB/Swiss-Prot
      A0A0N7KGA9, Q6K991
      UniProtKB/TrEMBL
      B8AEH8

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      35106025..35111752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6K991.1 GenPept UniProtKB/Swiss-Prot:Q6K991

    Gene LinkOut

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    Research Materials