zfp64 zinc finger protein 64 homolog (mouse) [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zfp64provided by ZNC
Official Full Name: zinc finger protein 64 homolog (mouse)provided by ZNC
Primary source: ZFIN:ZDB-GENE-031118-80
See related: Ensembl:ENSDARG00000061147 AllianceGenome:ZFIN:ZDB-GENE-031118-80
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fo94f09; wu:fo94f09
Summary: Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZFP64 (ZFP64 zinc finger protein). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	23	NC_007134.7 (38807527..38818410)
105	previous assembly	GRCz10 (GCF_000002035.5)	23	NC_007134.6 (38875801..38886681)

Chromosome 23 - NC_007134.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in positive regulation of transcription by RNA polymerase II	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: zinc finger protein 64

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001386517.1 → NP_001373446.1 zinc finger protein 64

Status: VALIDATED

Source sequence(s)

CABZ01034536

UniProtKB/TrEMBL

A0A8M1RRW7, F1R1S6

Related

ENSDARP00000081313.5, ENSDART00000086879.5

Conserved Domains (4) summary

COG5189
Location:176 → 260

SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

sd00017
Location:154 → 174

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam13465
Location:110 → 135

zf-H2C2_2; Zinc-finger double domain

cl41773
Location:408 → 605

SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4