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    pcp4l1 Purkinje cell protein 4 like 1 [ Danio rerio (zebrafish) ]

    Gene ID: 100008021, updated on 2-Nov-2024

    Summary

    Official Symbol
    pcp4l1provided by ZNC
    Official Full Name
    Purkinje cell protein 4 like 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040724-35
    See related
    Ensembl:ENSDARG00000023181 AllianceGenome:ZFIN:ZDB-GENE-040724-35
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    bZ1G18.14; si:rp71-1g18.14
    Summary
    Predicted to be part of ribonucleoprotein complex. Orthologous to human PCP4L1 (Purkinje cell protein 4 like 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See pcp4l1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (37995176..38000276, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (38012848..38017948, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene apolipoprotein L, 1 Neighboring gene apolipoprotein L domain containing 1a Neighboring gene DDB1 and CUL4 associated factor 8 Neighboring gene heterogeneous nuclear ribonucleoprotein C Neighboring gene complement component 1, q subcomponent-like 4 like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    Purkinje cell protein 4-like protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001161488.2NP_001154960.1  Purkinje cell protein 4-like protein 1

      See identical proteins and their annotated locations for NP_001154960.1

      Status: VALIDATED

      Source sequence(s)
      BC162193, CR376839
      UniProtKB/TrEMBL
      B3DFX0, F6NKT0, Q7T133
      Related
      ENSDARP00000033497.6, ENSDART00000034790.7

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      37995176..38000276 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394506.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      38042..43142 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)