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    si:dkey-276j7.1 si:dkey-276j7.1 [ Danio rerio (zebrafish) ]

    Gene ID: 561769, updated on 9-Dec-2024

    Summary

    Official Symbol
    si:dkey-276j7.1provided by ZNC
    Official Full Name
    si:dkey-276j7.1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060720-44
    See related
    Ensembl:ENSDARG00000090872 AllianceGenome:ZFIN:ZDB-GENE-060720-44
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fq41a10
    Summary
    Is expressed in brain and retina. Orthologous to human C7orf57 (chromosome 7 open reading frame 57). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See si:dkey-276j7.1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (12299184..12314488, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (12064326..12079646, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1a Neighboring gene plakophilin 4 Neighboring gene si:dkey-276j7.2 Neighboring gene uncharacterized LOC137495928

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein C7orf57 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001326548.1NP_001313477.1  uncharacterized protein C7orf57 homolog

      Status: VALIDATED

      Source sequence(s)
      BX950218, EH457050, EH461268
      UniProtKB/TrEMBL
      A0A8M1P8T0, E7FD23
      Related
      ENSDARP00000128722.1, ENSDART00000157058.3

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      12299184..12314488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005165849.4XP_005165906.1  uncharacterized protein C7orf57 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8M2BDC3