U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    znf839 zinc finger protein 839 [ Danio rerio (zebrafish) ]

    Gene ID: 566882, updated on 9-Dec-2024

    Summary

    Official Symbol
    znf839provided by ZNC
    Official Full Name
    zinc finger protein 839provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-4936
    See related
    Ensembl:ENSDARG00000076988 AllianceGenome:ZFIN:ZDB-GENE-030131-4936
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fe11g03; wu:fe11g03
    Summary
    Predicted to enable metal ion binding activity. Orthologous to human ZNF839 (zinc finger protein 839). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See znf839 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (31623356..31639863, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (31606395..31622987, complement)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene ADP-ribosylserine hydrolase Neighboring gene cyclin dependent kinase 2 interacting protein Neighboring gene putative nuclease HARBI1 Neighboring gene visual system homeobox 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423822.1NP_001410751.1  zinc finger protein 839

      Status: VALIDATED

      Source sequence(s)
      CR628322, CT027705
      UniProtKB/TrEMBL
      A0A8N7UV57, X1WCH5
      Related
      ENSDARP00000127918.1, ENSDART00000154196.2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      31623356..31639863 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394997.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      525442..531376 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)