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    ier5 immediate early response 5 [ Danio rerio (zebrafish) ]

    Gene ID: 359827, updated on 9-Dec-2024

    Summary

    Official Symbol
    ier5provided by ZNC
    Official Full Name
    immediate early response 5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030616-127
    See related
    Ensembl:ENSDARG00000009881 AllianceGenome:ZFIN:ZDB-GENE-030616-127
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fa99a02; wu:fb04b03; wu:fb11f08; zgc:136422; si:dz129i22.1
    Summary
    Orthologous to human IER5 (immediate early response 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See ier5 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (16497670..16499153)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (16471400..16472883)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:dkey-121a11.3 Neighboring gene syntaxin 6 Neighboring gene T-cell acute lymphocytic leukemia 1 Neighboring gene PDZK1 interacting protein 1 Neighboring gene PATJ crumbs cell polarity complex component

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • MGC136422, MGC173748

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    immediate early response gene 5 protein
    Names
    immediately early response

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007197.1NP_001007198.1  immediate early response gene 5 protein

      See identical proteins and their annotated locations for NP_001007198.1

      Status: PROVISIONAL

      Source sequence(s)
      AL592495
      UniProtKB/TrEMBL
      A0A2R8Q3B3, F6NGK8, Q90X37
      Related
      ENSDARP00000004179.5, ENSDART00000014330.7
      Conserved Domains (1) summary
      pfam05760
      Location:1270
      IER; Immediate early response protein (IER)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      16497670..16499153
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395100.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      282353..283836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)