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    LOC4349073 protein GRAVITROPIC IN THE LIGHT 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349073, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4349073
    Gene description
    protein GRAVITROPIC IN THE LIGHT 1
    Locus tag
    OSNPB_100508100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349073 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (20151721..20153681)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (19462075..19464039)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136353779 Neighboring gene monocopper oxidase-like protein SKU5 Neighboring gene protein YABBY 3-like Neighboring gene methionine aminopeptidase 1A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative gravitropism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to red or far red light IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein GRAVITROPIC IN THE LIGHT 1
    Names
    Os10g0508100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      20151721..20153681
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015757431.3 → XP_015612917.1  protein GRAVITROPIC IN THE LIGHT 1

      UniProtKB/TrEMBL
      A0A0P0XW11, B9G6J7, Q8L4S9
      Conserved Domains (1) summary
      pfam04859
      Location:84 → 196
      DUF641; Plant protein of unknown function (DUF641)
    Nucleotide Protein
    Heading Accession and Version

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