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    LOC9269029 uncharacterized LOC9269029 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9269029, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC9269029
    Gene description
    uncharacterized LOC9269029
    Locus tag
    OSNPB_080439150
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9269029 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (21493766..21499058)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (21355381..21360754)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351491 Neighboring gene protein ENHANCED DISEASE RESISTANCE 2-like Neighboring gene uncharacterized LOC4345678 Neighboring gene uncharacterized protein At2g39795, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cullin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-like protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein neddylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC9269029
    Names
    DCN1-like protein 4
    Os08g0439150
    P0524F03.13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      21493766..21499058
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015794591.3 → XP_015650077.1  uncharacterized protein LOC9269029 isoform X1

      Conserved Domains (1) summary
      pfam03556
      Location:127 → 241
      Cullin_binding; Cullin binding

    2. XM_015794592.3 → XP_015650078.1  uncharacterized protein LOC9269029 isoform X2

      UniProtKB/TrEMBL
      B9G146
      Conserved Domains (1) summary
      pfam03556
      Location:100 → 214
      Cullin_binding; Cullin binding
    Nucleotide Protein
    Heading Accession and Version

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