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    LOC4338024 acid phosphatase 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4338024, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4338024
    Gene description
    acid phosphatase 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4338024 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (5645912..5653263, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (5628702..5632946, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene acid phosphatase 1 Neighboring gene uncharacterized LOC136356715 Neighboring gene acid phosphatase 1-like Neighboring gene acid phosphatase 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    acid phosphatase 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      5645912..5653263 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066310490.1 → XP_066166587.1  acid phosphatase 1-like isoform X2

      UniProtKB/TrEMBL
      Q60DS8

    2. XM_066310489.1 → XP_066166586.1  acid phosphatase 1-like isoform X1

      UniProtKB/TrEMBL
      B7E453, Q60DS7
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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