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    LOC4343501 cysteine-rich receptor-like protein kinase 10 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343501, updated on 17-Jul-2024

    Summary

    Gene symbol
    LOC4343501
    Gene description
    cysteine-rich receptor-like protein kinase 10
    Locus tag
    OSNPB_070541500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    CRK10; OsJ_24608; OJ1008_E09.116
    Expression
    Biased expression in leaves after flowering (RPKM 38.7), roots after flowering (RPKM 31.4) and 2 other tissues See more
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    Genomic context

    See LOC4343501 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (21612791..21616313, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (21384743..21388278, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich receptor-like protein kinase 10 Neighboring gene cysteine-rich receptor-like protein kinase 6 Neighboring gene uncharacterized LOC9269913 Neighboring gene uncharacterized LOC9272442

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    cysteine-rich receptor-like protein kinase 10
    Names
    Cysteine-rich RLK10
    LOC_Os07g35700
    Os07g0541500
    P0458H05.133
    putative serine/threonine kinase protein
    NP_001409113.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001422184.1NP_001409113.1  cysteine-rich receptor-like protein kinase 10 precursor

      Status: VALIDATED

      Source sequence(s)
      AK111550, CI047742, CI275161
      UniProtKB/Swiss-Prot
      A3BKS4, Q0D5R2, Q84S59

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      21612791..21616313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)