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    LOC4325516 NAC domain-containing protein 48-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325516, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4325516
    Gene description
    NAC domain-containing protein 48-like
    Locus tag
    OSNPB_010675800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    NAC14; OJ1117_G01.14
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    Genomic context

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    See LOC4325516 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (28368957..28370290, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (27780942..27782281, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene probable glucuronosyltransferase Os01g0675500 Neighboring gene auxin-responsive protein IAA5-like Neighboring gene protein CHLORORESPIRATORY REDUCTION 41, chloroplastic Neighboring gene protein SPEAR3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAC domain-containing protein 48-like
    Names
    NAC transcription factor 14
    Os01g0675800
    OsNAC protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      28368957..28370290 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015766171.3 → XP_015621657.1  NAC domain-containing protein 48-like

      UniProtKB/TrEMBL
      A0A8J8XAI7, A2WTQ6, A2ZWH3, Q0JKG6, Q8LQP7
      Conserved Domains (1) summary
      pfam02365
      Location:18 → 145
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

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