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    LOC4325295 uncharacterized LOC4325295 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325295, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4325295
    Gene description
    uncharacterized LOC4325295
    Locus tag
    OSNPB_010698000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1116_H09.31
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    Genomic context

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    See LOC4325295 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (29469715..29471155, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (28881468..28882969, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene aspartic proteinase nepenthesin-1 Neighboring gene UDP-glycosyltransferase 88B1 Neighboring gene uncharacterized LOC4325296 Neighboring gene small nucleolar RNA snoR101 Neighboring gene protein STRICTOSIDINE SYNTHASE-LIKE 10-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4325295
    Names
    Os01g0698000
    VIP1 protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      29469715..29471155 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015766944.3 → XP_015622430.1  uncharacterized protein LOC4325295

      UniProtKB/TrEMBL
      A0A0P0V716, B8A823, B9EZ02, Q8LJ05
      Conserved Domains (1) summary
      PRK10811
      Location:31 → 184
      rne; ribonuclease E; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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