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    LOC4331112 glutathione reductase, cytosolic-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331112, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4331112
    Gene description
    glutathione reductase, cytosolic-like
    Locus tag
    OSNPB_020813500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    GR; GRC2; GRase; RGRC2; OsJ_08842; OJ1293_E04.4-1
    Expression
    Ubiquitous expression in leaves after flowering (RPKM 111.5), roots after flowering (RPKM 93.8) and 6 other tissues See more
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    Genomic context

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    See LOC4331112 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (35336150..35342205)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (34837744..34843836)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene F-box protein PP2-B10 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene 3-ketoacyl-CoA synthase 12 Neighboring gene uncharacterized LOC112937871

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Gene cloning and expression of cytosolic glutathione reductase in rice (Oryza sativa L.). Kaminaka H, et al. Plant Cell Physiol, 1998 Dec. PMID 10050312
    2. Expression of ascorbate peroxidase and glutathione reductase in roots of rice seedlings in response to NaCl and H2O2. Tsai YC, et al. J Plant Physiol, 2005 Mar. PMID 15832681
    3. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
    4. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Exogenously applied H2O2 enhanced the activity and expression of glutathione reductase.
      Title: Expression of ascorbate peroxidase and glutathione reductase in roots of rice seedlings in response to NaCl and H2O2.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glutathione-disulfide reductase (NADPH) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell redox homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glutathione metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutathione reductase, cytosolic
    Names
    LOC_Os02g56850
    OSJNBa0053L11.26-1
    cytosolic glutathione reductase
    NP_001388926.1
    NP_001388927.1

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001401997.1 → NP_001388926.1  glutathione reductase, cytosolic

      Status: VALIDATED

      Source sequence(s)
      AK058270, CI749662, D85751
      UniProtKB/Swiss-Prot
      A0A0P0VR51, P48642, Q0DWI9, Q6K3E8, Q8GRV3, Q9ZNS8
      UniProtKB/TrEMBL
      A0A6F8FR09

    2. NM_001401998.1 → NP_001388927.1  glutathione reductase, cytosolic

      Status: VALIDATED

      Source sequence(s)
      CB677007, CI072048, D78136
      UniProtKB/Swiss-Prot
      A0A0P0VR51, P48642, Q0DWI9, Q6K3E8, Q8GRV3, Q9ZNS8
      UniProtKB/TrEMBL
      A0A6F8FR09

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      35336150..35342205
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P48642.2 GenPept UniProtKB/Swiss-Prot:P48642

    Gene LinkOut

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    Research Materials