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    LOC4333690 glycine-rich RNA-binding protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4333690, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4333690
    Gene description
    glycine-rich RNA-binding protein 2
    Locus tag
    OSNPB_030670700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OSGRP1
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    Genomic context

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    See LOC4333690 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (27332258..27333343)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (26460041..26461157)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene uncharacterized LOC107278378 Neighboring gene transcription factor bHLH19 Neighboring gene uncharacterized LOC136355676

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycine-rich RNA-binding protein 2
    Names
    Os03g0670700
    glycin-rich RNA-binding protein
    glycine-rich RNA binding protein
    glycine-rich protein
    receptor-like serine threonine kinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      27332258..27333343
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015775416.3 → XP_015630902.1  glycine-rich RNA-binding protein 2

      UniProtKB/TrEMBL
      A0A0P0W1Z0, O22384, Q6ASX7
      Conserved Domains (1) summary
      cd21608
      Location:9 → 84
      RRM2_NsCP33_like; RNA recognition motif 2 (RRM2) found in Nicotiana sylvestris chloroplastic 33 kDa ribonucleoprotein (NsCP33) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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