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    LOC4340788 UDP-glycosyltransferase CGT [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340788, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4340788
    Gene description
    UDP-glycosyltransferase CGT
    Locus tag
    OSNPB_060289900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    CGTb; B1026E06.3
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    Genomic context

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    See LOC4340788 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (10767548..10769356, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (10588151..10589943, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase CGT Neighboring gene uncharacterized LOC9269426 Neighboring gene uncharacterized LOC136356977 Neighboring gene uncharacterized LOC9267619

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein α -Subunit. Biswal AK, et al. Proteomics, 2019 May. PMID 30866160

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-glycosyltransferase CGT
    Names
    2-hydroxyflavanone C-arabinosyltransferase
    Os06g0289900
    UDP-glucose:2-hydroxyflavanone C-glucosyltransferase
    UDP-glycosyltransferase 708A6
    putative UDP-glycosyltransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      10767548..10769356 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015786162.3 → XP_015641648.1  UDP-glycosyltransferase CGT

      UniProtKB/TrEMBL
      A0A0N7KLY4, A2YBW4, A3CA23, Q5VME5
      Conserved Domains (1) summary
      cl10013
      Location:21 → 468
      Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
    Nucleotide Protein
    Heading Accession and Version

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