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    LOC4324825 cytochrome P450 86A1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324825, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4324825
    Gene description
    cytochrome P450 86A1
    Locus tag
    OSNPB_010854800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4324825 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (37467054..37469084)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (36840058..36842115)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene WUSCHEL-related homeobox 9-like Neighboring gene uncharacterized LOC136355001 Neighboring gene glycerol-3-phosphate 2-O-acyltransferase 6 Neighboring gene uncharacterized LOC112937601

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 86A1
    Names
    B1096A10.16
    Os01g0854800
    putative cytochrome P450

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      37467054..37469084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015776231.3 → XP_015631717.1  cytochrome P450 86A1

      UniProtKB/TrEMBL
      A0A0N7KE31, A2WX38, A2ZZP0, Q5N7U6
      Conserved Domains (1) summary
      PLN03195
      Location:26 → 517
      PLN03195; fatty acid omega-hydroxylase; Provisional
    Nucleotide Protein
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