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    LOC4333509 SH3 domain-containing protein C23A1.17 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4333509, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4333509
    Gene description
    SH3 domain-containing protein C23A1.17
    Locus tag
    OSNPB_030629900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4333509 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (24911349..24916399, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (24047430..24053758, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355522 Neighboring gene uncharacterized LOC107278448 Neighboring gene uncharacterized LOC136355666 Neighboring gene uncharacterized LOC136355667

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    SH3 domain-containing protein C23A1.17
    Names
    Os03g0629900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      24911349..24916399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066308733.1 → XP_066164830.1  SH3 domain-containing protein C23A1.17

      UniProtKB/TrEMBL
      A0A0N7KHP2, Q10GF7

    RNA

    1. XR_001544865.3 RNA Sequence

    2. XR_010740121.1 RNA Sequence

    3. XR_001544858.3 RNA Sequence

    4. XR_010740122.1 RNA Sequence

    5. XR_010740123.1 RNA Sequence

    6. XR_001544861.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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