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    LOC4345530 BTB/POZ and MATH domain-containing protein 3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4345530, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4345530
    Gene description
    BTB/POZ and MATH domain-containing protein 3
    Locus tag
    OSNPB_080406600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0453D01.7
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    Genomic context

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    See LOC4345530 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (19577613..19579000, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (19441258..19442909, complement)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene sulfate transporter 1.2 Neighboring gene BTB/POZ and MATH domain-containing protein 3 Neighboring gene BTB/POZ and MATH domain-containing protein 3 Neighboring gene uncharacterized LOC4345533

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ and MATH domain-containing protein 3
    Names
    Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain MBTB27
    Os08g0406600
    putative speckle-type POZ protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      19577613..19579000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015794211.3 → XP_015649697.3  BTB/POZ and MATH domain-containing protein 3

      UniProtKB/TrEMBL
      A0A0P0XFF8, Q6Z9X9
    Nucleotide Protein
    Heading Accession and Version

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