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    LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326614, updated on 3-Dec-2024

    Summary

    Gene symbol
    LOC4326614
    Gene description
    DEAD-box ATP-dependent RNA helicase 25-like
    Locus tag
    OSNPB_010618400
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsJ_02628; B1040D09.6
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    Genomic context

    See LOC4326614 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (25176362..25179990)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (24598169..24601865)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 7 Neighboring gene uncharacterized LOC9271825 Neighboring gene DEAD-box ATP-dependent RNA helicase 26-like Neighboring gene phospholipase A1 PLIP1, chloroplastic

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    dEAD-box ATP-dependent RNA helicase 25
    Names
    DEAD-box ATP-dependent RNA helicase 25
    LOC_Os01g43120
    putative RNA helicase
    NP_001384968.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001398039.1NP_001384968.1  dEAD-box ATP-dependent RNA helicase 25

      Status: VALIDATED

      Source sequence(s)
      AK067570
      UniProtKB/Swiss-Prot
      B7EDN0, Q5ZBH5
      UniProtKB/TrEMBL
      B8ABW9
      Conserved Domains (1) summary
      COG0513
      Location:105534
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      25176362..25179990
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)