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    LOC4344546 UPF0481 protein At3g47200 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344546, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4344546
    Gene description
    UPF0481 protein At3g47200
    Locus tag
    OSNPB_080120900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4344546 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (1160177..1161777)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (1148916..1150549)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene fructose-bisphosphate aldolase 6, cytosolic Neighboring gene UPF0481 protein At3g47200 Neighboring gene UPF0481 protein At3g47200-like Neighboring gene uncharacterized LOC136351405

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    UPF0481 protein At3g47200
    Names
    B1203H11.17
    OSJNBa0091F23.2
    Os08g0120900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      1160177..1161777
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015794221.3 → XP_015649707.1  UPF0481 protein At3g47200

      UniProtKB/TrEMBL
      A3BP55, B8BAD6, Q6YPE9
      Conserved Domains (1) summary
      pfam03140
      Location:42 → 446
      DUF247; Plant protein of unknown function
    Nucleotide Protein
    Heading Accession and Version

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