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    LOC4341968 uncharacterized LOC4341968 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341968, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4341968
    Gene description
    uncharacterized LOC4341968
    Locus tag
    OSNPB_060701300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0596H10.5
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    Genomic context

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    See LOC4341968 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (30383088..30390767, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (29516276..29523999, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene eukaryotic initiation factor 4A-1-like Neighboring gene UDP-sugar pyrophosphorylase-like Neighboring gene 60S acidic ribosomal protein P3-like Neighboring gene uncharacterized LOC107281384

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4341968
    Names
    ABC transporter-like
    Os06g0701300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      30383088..30390767 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015788221.3 → XP_015643707.1  uncharacterized protein LOC4341968

      UniProtKB/TrEMBL
      B9FQR1
      Conserved Domains (2) summary
      cd05121
      Location:89 → 343
      ABC1_ADCK3-like; Activator of bc1 complex (ABC1) kinases (also called aarF domain containing kinase 3) and similar proteins
      pfam00144
      Location:487 → 726
      Beta-lactamase

    2. XM_066311524.1 → XP_066167621.1  uncharacterized protein LOC4341968

      UniProtKB/TrEMBL
      B9FQR1

    3. XM_066311523.1 → XP_066167620.1  uncharacterized protein LOC4341968

      UniProtKB/TrEMBL
      B9FQR1
    Nucleotide Protein
    Heading Accession and Version

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