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    LOC4331929 cytochrome b561 and DOMON domain-containing protein At3g25290 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331929, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4331929
    Gene description
    cytochrome b561 and DOMON domain-containing protein At3g25290
    Locus tag
    OSNPB_030194900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4331929 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (4970642..4972781)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (4923851..4926083)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit TIM22-3 Neighboring gene cytochrome b561 and DOMON domain-containing protein At5g35735 Neighboring gene aminotransferase ALD1 homolog Neighboring gene ribosome biogenesis protein TSR3 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cytochrome b561 and DOMON domain-containing protein At3g25290
    Names
    Os03g0194900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      4970642..4972781
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015776213.2 → XP_015631699.1  cytochrome b561 and DOMON domain-containing protein At3g25290

      UniProtKB/TrEMBL
      A0A0P0VU41, A2XDI0, Q8H7W7
      Conserved Domains (2) summary
      cd08760
      Location:176 → 356
      Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
      cd09629
      Location:35 → 185
      DOMON_CIL1_like; DOMON-like domain of Brassica carinata CIL1 and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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