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    LOC4327340 lachrymatory-factor synthase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327340, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4327340
    Gene description
    lachrymatory-factor synthase
    Locus tag
    OSNPB_010198900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4327340 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (5383070..5384148)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (5373587..5374794)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112939592 Neighboring gene uncharacterized LOC4327339 Neighboring gene uncharacterized LOC107277551 Neighboring gene organic cation/carnitine transporter 2-like Neighboring gene uncharacterized LOC4327343

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    lachrymatory-factor synthase
    Names
    B1046G12.28
    Os01g0198900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      5383070..5384148
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015771301.3 → XP_015626787.1  lachrymatory-factor synthase

      UniProtKB/TrEMBL
      A2WLQ6, Q0JPV6, Q8S2Q8
      Conserved Domains (1) summary
      cd07821
      Location:37 → 185
      PYR_PYL_RCAR_like; Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins
    Nucleotide Protein
    Heading Accession and Version

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