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    LOC4339655 oil body-associated protein 1A [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339655, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4339655
    Gene description
    oil body-associated protein 1A
    Locus tag
    OSNPB_050569500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4339655 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (28531813..28532941)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (28346734..28347898)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene common plant regulatory factor 1 Neighboring gene putative glucose-6-phosphate 1-epimerase Neighboring gene F-box protein At2g23160-like Neighboring gene uncharacterized LOC4339656

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    oil body-associated protein 1A
    Names
    Os05g0569500

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      28531813..28532941
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015782007.3 → XP_015637493.1  oil body-associated protein 1A

      UniProtKB/TrEMBL
      B9FI75, Q0DFU5, Q7G156, Q9ZNS9
      Conserved Domains (1) summary
      pfam06884
      Location:32 → 197
      DUF1264; Protein of unknown function (DUF1264)
    Nucleotide Protein
    Heading Accession and Version

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