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    LOC9267088 Bowman-Birk type bran trypsin inhibitor-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9267088, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9267088
    Gene description
    Bowman-Birk type bran trypsin inhibitor-like
    Locus tag
    OSNPB_010124650
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0044F08.5
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    Genomic context

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    See LOC9267088 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (1373043..1373882, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (1365555..1366498, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g51860 Neighboring gene Bowman-Birk type bran trypsin inhibitor-like Neighboring gene putative E3 ubiquitin-protein ligase SINA-like 6 Neighboring gene E3 ubiquitin-protein ligase SINA-like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Bowman-Birk type bran trypsin inhibitor-like
    Names
    Os01g0124650
    P0037C04.22
    putative Bowman Birk trypsin inhibitor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      1373043..1373882 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015779087.2 → XP_015634573.1  Bowman-Birk type bran trypsin inhibitor-like

      UniProtKB/TrEMBL
      B7E9D7, Q9M3W1
      Conserved Domains (2) summary
      smart00269
      Location:124 → 179
      BowB; Bowman-Birk type proteinase inhibitor
      cd00023
      Location:124 → 179
      BBI; Bowman-Birk type proteinase inhibitor (BBI); family of plant serine protease inhibitors that block trypsin or chymotrypsin.They are either single-headed (one reactive site, one inactive site, present mainly in monocotyledonous seeds) or double-headed ...
    Nucleotide Protein
    Heading Accession and Version

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