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    LOC4324613 uncharacterized protein At2g39795, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324613, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4324613
    Gene description
    uncharacterized protein At2g39795, mitochondrial
    Locus tag
    OSNPB_010771100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4324613 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (33144514..33147232, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (32538896..32541654, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene copper transporter 3-like Neighboring gene protein LURP-one-related 5 Neighboring gene fra a 1-associated protein Neighboring gene ubiquitin C-terminal hydrolase 13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein At2g39795, mitochondrial
    Names
    Os01g0771100
    P0665A11.28
    mitochondrial acidic protein mam33
    mitochondrial glycoprotein family protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      33144514..33147232 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015772612.3 → XP_015628098.1  uncharacterized protein At2g39795, mitochondrial isoform X1

      Conserved Domains (1) summary
      pfam02330
      Location:80 → 231
      MAM33; Mitochondrial glycoprotein

    2. XM_015772620.3 → XP_015628106.1  uncharacterized protein At2g39795, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A8J8XI86, A2WVI5, A2ZY93, Q0JIY2, Q94ED9
      Conserved Domains (1) summary
      pfam02330
      Location:80 → 229
      MAM33; Mitochondrial glycoprotein
    Nucleotide Protein
    Heading Accession and Version

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