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    LOC4326935 dehydrin Rab25-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326935, updated on 17-Jul-2024

    Summary

    Gene symbol
    LOC4326935
    Gene description
    dehydrin Rab25-like
    Locus tag
    OSNPB_010702500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    rDRP1; rab25
    Expression
    Restricted expression toward mature seeds (RPKM 1034.6) See more
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    Genomic context

    See LOC4326935 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (29711748..29712839)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (29123529..29124598)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4326934 Neighboring gene chaperone protein dnaJ 10 Neighboring gene myb-related protein Hv33 Neighboring gene nuclear poly(A) polymerase 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    General protein information

    Preferred Names
    dehydrin Rab25
    Names
    Drought-resistant protein 1
    LOC_Os01g50700
    P0421H07.13
    dehydrin-like
    rab25 product

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001406293.1NP_001393222.1  dehydrin Rab25

      Status: VALIDATED

      Source sequence(s)
      AY333185
      UniProtKB/Swiss-Prot
      P30287, Q5N9R4, Q7E0Y0
      UniProtKB/TrEMBL
      Q0JK19

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      29711748..29712839
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)