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    LOC4334156 LRR receptor-like serine/threonine-protein kinase RPK2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4334156, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4334156
    Gene description
    LRR receptor-like serine/threonine-protein kinase RPK2
    Locus tag
    OSNPB_030756200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4334156 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (32177737..32182962, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (31207323..31212543, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL13w Neighboring gene small nucleolar RNA SNORD24 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene PLASMODESMATA CALLOSE-BINDING PROTEIN 2 Neighboring gene protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LRR receptor-like serine/threonine-protein kinase RPK2
    Names
    Os03g0756200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      32177737..32182962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015776010.3 → XP_015631496.1  LRR receptor-like serine/threonine-protein kinase RPK2

      UniProtKB/TrEMBL
      A2XM47, A3AMU1, Q0DNF9, Q75J19
      Conserved Domains (2) summary
      PLN00113
      Location:47 → 1042
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:129 → 150
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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