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    LOC4338710 kinesin-like protein KIN-14J [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4338710, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4338710
    Gene description
    kinesin-like protein KIN-14J
    Locus tag
    OSNPB_050397900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Broad expression in flower buds (RPKM 6.2), flowers (RPKM 2.7) and 6 other tissues See more
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    Genomic context

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    See LOC4338710 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (19461180..19465411)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (19359118..19363496)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene preprotein translocase subunit SCY2, chloroplastic Neighboring gene uncharacterized LOC9271739 Neighboring gene cyclin-P3-1-like Neighboring gene ARM REPEAT PROTEIN INTERACTING WITH ABF2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kinesin-like protein KIN-14J
    Names
    Os05g0397900
    kinesin KP1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      19461180..19465411
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015784981.3 → XP_015640467.3  kinesin-like protein KIN-14J

    Nucleotide Protein
    Heading Accession and Version

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