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    LOC9266860 probable calcium-binding protein CML18 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9266860, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC9266860
    Gene description
    probable calcium-binding protein CML18
    Locus tag
    OSNPB_050223000
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    CML18; OJ1532_D06.3
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    Genomic context

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    See LOC9266860 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (7565824..7566687, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (7533577..7534577, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene BURP domain-containing protein 8 Neighboring gene ABC transporter G family member 12 Neighboring gene glycine-rich RNA-binding protein GRP2A Neighboring gene glycine-rich RNA-binding protein blt801

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A network of rice genes associated with stress response and seed development. Cooper B, et al. Proc Natl Acad Sci U S A, 2003 Apr 15. PMID 12684538, Free PMC Article
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable calcium-binding protein CML18
    Names
    Calmodulin-like protein 18
    LOC_Os05g13580
    calmodulin-related protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001424152.1 → NP_001411081.1  probable calcium-binding protein CML18

      Status: VALIDATED

      Source sequence(s)
      AY224437, CI513376, CI643834
      UniProtKB/TrEMBL
      A0A0P0WJJ8, A0A8J8YBD8, A2Y1Q8, B9FJ38

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      7565824..7566687 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0DJV6.1 GenPept UniProtKB/Swiss-Prot:Q0DJV6

    Gene LinkOut

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