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    LOC4335126 F-box protein CPR1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4335126, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4335126
    Gene description
    F-box protein CPR1
    Locus tag
    OSNPB_040191800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4335126 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (6355555..6357063, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (6262554..6264068, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4335125 Neighboring gene uncharacterized LOC136356278 Neighboring gene uncharacterized LOC136356143 Neighboring gene uncharacterized LOC112938798

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box protein CPR1
    Names
    F-box domain-containing protein
    F-box protein CPR30
    Os04g0191800

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      6355555..6357063 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015778384.3 → XP_015633870.1  F-box protein CPR1

      UniProtKB/TrEMBL
      A2XQR7, Q0JEW8, Q7XSK4
      Conserved Domains (2) summary
      smart00256
      Location:18 → 59
      FBOX; A Receptor for Ubiquitination Targets
      cl23987
      Location:113 → 345
      FBA_1; F-box associated
    Nucleotide Protein
    Heading Accession and Version

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