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    LOC4344477 protein Rf1, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344477, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4344477
    Gene description
    protein Rf1, mitochondrial
    Locus tag
    OSNPB_080110200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    Rf6
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    Genomic context

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    See LOC4344477 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (541691..544381)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (536297..539643)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene putative methylesterase 14, chloroplastic Neighboring gene uncharacterized LOC4344476 Neighboring gene phytolongin Phyl1.1 Neighboring gene glycosyltransferase BC10-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Rf1, mitochondrial
    Names
    Os08g0110200
    P0007D08.28
    putative PPR protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      541691..544381
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015794899.3 → XP_015650385.1  protein Rf1, mitochondrial

      UniProtKB/TrEMBL
      A0A0P0XAT2, A0A6G7AFQ8, A3BNY6, Q6ZC60
      Conserved Domains (3) summary
      PLN03218
      Location:133 → 543
      PLN03218; maturation of RBCL 1; Provisional
      sd00004
      Location:208 → 235
      PPR; PPR repeat [structural motif]
      pfam13041
      Location:554 → 603
      PPR_2; PPR repeat family
    Nucleotide Protein
    Heading Accession and Version

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