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    LOC4343849 UDP-arabinopyranose mutase 3-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343849, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4343849
    Gene description
    UDP-arabinopyranose mutase 3-like
    Locus tag
    OSNPB_070604800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    RGP3; UAM3; OsUAM3; OsJ_25044
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    Genomic context

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    See LOC4343849 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (24998146..25001395)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (24773282..24776524)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4343847 Neighboring gene uncharacterized LOC4343848 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene MADS-box transcription factor 18-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-arabinopyranose mutase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in UDP-L-arabinose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in plant-type cell wall biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uDP-arabinopyranose mutase 3
    Names
    LOC_Os07g41360
    OSJNBb0040H10.21
    Reversibly glycosylated polypeptide 3
    UDP-L-arabinose mutase 3
    UDP-arabinopyranose mutase 3
    putative reversibly glycosylated polypeptide
    NP_001409188.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001422259.1 → NP_001409188.1  uDP-arabinopyranose mutase 3

      Status: VALIDATED

      Source sequence(s)
      AK061294, CI132182
      UniProtKB/Swiss-Prot
      A0A0P0X8G9, Q6Z4G3

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      24998146..25001395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6Z4G3.1 GenPept UniProtKB/Swiss-Prot:Q6Z4G3

    Gene LinkOut

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