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    LOC4339131 cytochrome P450 714D1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339131, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4339131
    Gene description
    cytochrome P450 714D1-like
    Locus tag
    OSNPB_050482400
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    EUI; EUI1; CYP714D1; OsJ_18961
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    Genomic context

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    See LOC4339131 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (23843118..23853023)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (23728416..23738445)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene protein PIN-LIKES 6 Neighboring gene F-box protein At5g50450-like Neighboring gene uncharacterized LOC107278337 Neighboring gene uncharacterized LOC4339132

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ELONGATED UPPERMOST INTERNODE encodes a cytochrome P450 monooxygenase that epoxidizes gibberellins in a novel deactivation reaction in rice. Zhu Y, et al. Plant Cell, 2006 Feb. PMID 16399803, Free PMC Article
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 714D1
    Names
    LOC_Os05g40384
    OSJNBa0095J22.13
    Protein ELONGATED UPPERMOST INTERNODE 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001420625.1 → NP_001407554.1  cytochrome P450 714D1

      Status: VALIDATED

      Source sequence(s)
      AY987039, CI175563, CI704632, CI771797
      UniProtKB/Swiss-Prot
      A0A0P0WNQ4, B9FJW9, Q5KQH7
      UniProtKB/TrEMBL
      B8AZB6

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      23843118..23853023
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5KQH7.1 GenPept UniProtKB/Swiss-Prot:Q5KQH7

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials