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    LOC4331123 glutathionyl-hydroquinone reductase YqjG [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331123, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4331123
    Gene description
    glutathionyl-hydroquinone reductase YqjG
    Locus tag
    OSNPB_020814800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1293_E04.24
    Expression
    Broad expression in leaves before flowering (RPKM 9.4), leaves after flowering (RPKM 3.6) and 5 other tissues See more
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    Genomic context

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    See LOC4331123 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (35412203..35414067)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (34913620..34915553)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene cytochrome c1 2, heme protein, mitochondrial Neighboring gene protein PHOSPHATE STARVATION RESPONSE 1 Neighboring gene 60S ribosomal protein L23 Neighboring gene nicotinamide/nicotinic acid mononucleotide adenylyltransferase-like Neighboring gene 60S ribosomal protein L37-3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutathionyl-hydroquinone reductase YqjG
    Names
    Os02g0814800
    glutathione S-transferase C-terminal domain-containing protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417080.1 → NP_001404009.1  glutathionyl-hydroquinone reductase YqjG

      Status: VALIDATED

      Source sequence(s)
      AK109850, AP014958, CI142387, CI223537
      UniProtKB/TrEMBL
      A0A0P0VRC9, A2XAY6, Q0DWH8, Q6K8N9

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      35412203..35414067
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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