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    LOC4344473 serine/threonine-protein kinase-like protein CCR4 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344473, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4344473
    Gene description
    serine/threonine-protein kinase-like protein CCR4
    Locus tag
    OSNPB_080109800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4344473 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (502103..505012)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (496699..500438)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene bromodomain-containing factor 2 Neighboring gene uncharacterized LOC107276093 Neighboring gene uncharacterized LOC4344474 Neighboring gene putative methylesterase 14, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase-like protein CCR4
    Names
    Os08g0109800
    P0007D08.20
    putative cytokinin-regulated kinase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      502103..505012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015793063.3 → XP_015648549.1  serine/threonine-protein kinase-like protein CCR4

      UniProtKB/TrEMBL
      A0A0P0XAV7, A3BNY2, Q6ZC64
      Conserved Domains (1) summary
      cd14066
      Location:486 → 778
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    Nucleotide Protein
    Heading Accession and Version

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