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    LOC4344463 pectinesterase inhibitor 28-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344463, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4344463
    Gene description
    pectinesterase inhibitor 28-like
    Locus tag
    OSNPB_080108100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    PMEI28; OsPMEI28
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    Genomic context

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    See LOC4344463 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (394700..395804, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (389700..391191, complement)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene protein Rf1, mitochondrial-like Neighboring gene protein mago nashi homolog 1-like Neighboring gene chromatin assembly factor 1 subunit FAS2 homolog Neighboring gene protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables enzyme inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pectinesterase inhibitor 28
    Names
    LOC_Os08g01670
    Os08g0108100
    P0450B04.30
    Pectin methylesterase inhibitor 28
    Pectinesterase inhibitor 28
    nvertase/pectin methylesterase inhibitor -like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001422377.1 → NP_001409306.1  pectinesterase inhibitor 28 precursor

      Status: VALIDATED

      Source sequence(s)
      AK070037, AU184044, CI438462
      UniProtKB/Swiss-Prot
      Q0J8J8, Q6ZD64
      UniProtKB/TrEMBL
      B8BA42

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      394700..395804 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0J8J8.1 GenPept UniProtKB/Swiss-Prot:Q0J8J8

    Gene LinkOut

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