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    LOC4343352 UDP-glycosyltransferase 88B1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343352, updated on 17-Aug-2024

    Summary

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    Gene symbol
    LOC4343352
    Gene description
    UDP-glycosyltransferase 88B1
    Locus tag
    OSNPB_070510400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    UGT88C3; OsJ_24401; OsUGT88C3
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    Genomic context

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    See LOC4343352 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (19681375..19683027, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (19454504..19456234, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene glucan endo-1,3-beta-glucosidase 1 Neighboring gene uncharacterized LOC4343351 Neighboring gene anthocyanidin 3-O-glucosyltransferase 6 Neighboring gene uncharacterized LOC112939605

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-glycosyltransferase 88B1
    Names
    LOC_Os07g32620
    Malvidin galactosylase UGT88C3
    OSNPB_070510400
    Os07g0510400
    P0409B11.23
    UDP-glycosyltransferase 88C3
    putative glucosyltransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      19681375..19683027 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015789827.3 → XP_015645313.1  UDP-glycosyltransferase 88B1

      UniProtKB/Swiss-Prot
      A2YLQ6, A3BK75, Q6Z4C0
      Conserved Domains (1) summary
      PLN00164
      Location:1 → 482
      PLN00164; glucosyltransferase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A3BK75.1 GenPept UniProtKB/Swiss-Prot:A3BK75

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