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    LOC4332581 uncharacterized LOC4332581 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332581, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4332581
    Gene description
    uncharacterized LOC4332581
    Locus tag
    OSNPB_030302200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4332581 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (10704881..10709005)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (10649068..10655592)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene peroxisomal membrane protein 11-3-like Neighboring gene uncharacterized LOC136355523 Neighboring gene uncharacterized LOC4332582 Neighboring gene serine/threonine-protein phosphatase 7 long form homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4332581
    Names
    Os03g0302200
    PHD-finger family protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      10704881..10709005
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026024331.2 → XP_025880116.1  uncharacterized protein LOC4332581

      UniProtKB/TrEMBL
      A2XFQ9, A3AH39, Q10MN1
      Conserved Domains (2) summary
      cd16574
      Location:413 → 455
      RING-HC_Topors; RING finger, HC subclass, found in topoisomerase I-binding arginine/serine-rich protein (Topors) and similar proteins
      cl22851
      Location:505 → 549
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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