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    LOC4342419 peroxisomal membrane protein 13 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342419, updated on 16-Jul-2024

    Summary

    Gene symbol
    LOC4342419
    Gene description
    peroxisomal membrane protein 13
    Locus tag
    OSNPB_070152800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

    See LOC4342419 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (2808477..2811700)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (2794092..2801348)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136357170 Neighboring gene probable glutathione S-transferase parC Neighboring gene peroxisomal (S)-2-hydroxy-acid oxidase GLO5-like Neighboring gene protein TIFY 5

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein import into peroxisome matrix, docking IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of peroxisomal importomer complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    peroxisomal membrane protein 13
    Names
    B1364A02.32
    Os07g0152800
    putative glycine-rich protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001403023.1NP_001389952.1  peroxisomal membrane protein 13

      Status: VALIDATED

      Source sequence(s)
      AK065458, AP014963, AU032508
      UniProtKB/TrEMBL
      A0A0P0X2U5, B8B7C4, Q0D8K1, Q6YT74

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      2808477..2811700
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066311954.1XP_066168051.1  peroxisomal membrane protein 13 isoform X1