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    LOC4331892 WEB family protein At5g16730, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331892, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4331892
    Gene description
    WEB family protein At5g16730, chloroplastic
    Locus tag
    OSNPB_030189300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4331892 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (4676704..4678563, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (4665308..4667035, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene homeobox-leucine zipper protein HOX13-like Neighboring gene uncharacterized LOC4331891 Neighboring gene alcohol dehydrogenase-like 7 Neighboring gene alcohol dehydrogenase-like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    WEB family protein At5g16730, chloroplastic
    Names
    Os03g0189300
    cingulin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      4676704..4678563 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015775276.3 → XP_015630762.1  WEB family protein At5g16730, chloroplastic

      UniProtKB/TrEMBL
      A0A0P0VU42, B8APR1, Q0DUF3, Q8H7N3
      Conserved Domains (1) summary
      TIGR02169
      Location:48 → 355
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    Nucleotide Protein
    Heading Accession and Version

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