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    LOC4327947 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327947, updated on 1-Aug-2024

    Summary

    Gene symbol
    LOC4327947
    Gene description
    LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2
    Locus tag
    OSNPB_010689900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0034C09.3
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    Try the new Transcript table

    Genomic context

    See LOC4327947 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (29071016..29091412, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (28482930..28503463, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4327945 Neighboring gene uncharacterized LOC4327946 Neighboring gene RING-H2 finger protein ATL39-like Neighboring gene LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.7 Neighboring gene PR5-like receptor kinase

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables polysaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2
    Names
    Os01g0689900
    Os01g0690200
    P0034C09.1-1
    P0034C09.1-2
    P0034C09.1-3
    probable receptor-like protein kinase At1g67000
    probable serine/threonine-protein kinase At1g18390
    receptor-like protein kinase-like
    wall-associated kinase 4-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      29071016..29091412 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026020155.2XP_025875940.1  LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X4

      Conserved Domains (3) summary
      cd14066
      Location:356626
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam13947
      Location:22132
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
      pfam14380
      Location:156256
      WAK_assoc; Wall-associated receptor kinase C-terminal
    2. XM_026020153.2XP_025875938.2  LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X1

      UniProtKB/TrEMBL
      A0A0P0V6X0, A0A5S6RC66, Q0JK89, Q5N7Q8
    3. XM_015794335.3XP_015649821.1  LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X3

      Conserved Domains (3) summary
      smart00220
      Location:373641
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14066
      Location:375645
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam14380
      Location:176267
      WAK_assoc; Wall-associated receptor kinase C-terminal
    4. XM_015794327.3XP_015649813.1  LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2

      UniProtKB/TrEMBL
      A0A0P0V6Y1, A2WTY6, Q5N7Q7
      Conserved Domains (3) summary
      smart00220
      Location:383651
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14066
      Location:385655
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam14380
      Location:181273
      WAK_assoc; Wall-associated receptor kinase C-terminal