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    LOC9269420 monothiol glutaredoxin-S10-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9269420, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC9269420
    Gene description
    monothiol glutaredoxin-S10-like
    Locus tag
    OSNPB_080565800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    GRXS10; OsJ_28319
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    Genomic context

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    See LOC9269420 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (28492357..28494562)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (28343289..28345553)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351348 Neighboring gene histone-lysine N-methyltransferase family member SUVH9 Neighboring gene GDSL esterase/lipase At5g33370 Neighboring gene bifunctional TH2 protein, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione disulfide oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    monothiol glutaredoxin-S10
    Names
    LOC_Os08g45140
    OSJNBa0044E16.18-1
    OSJNBa0044E16.18-2
    P0705A05.134-1
    P0705A05.134-2
    glutaredoxin protein family-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001424290.1 → NP_001411219.1  monothiol glutaredoxin-S10

      Status: VALIDATED

      Source sequence(s)
      AK062431, CV720904
      UniProtKB/Swiss-Prot
      A3BVV3, Q0J3L4, Q7EZK3, Q84Z96
      UniProtKB/TrEMBL
      A2YY90

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      28492357..28494562
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066312894.1 → XP_066168991.1  monothiol glutaredoxin-S10 isoform X1

      UniProtKB/TrEMBL
      A2YY90
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0J3L4.2 GenPept UniProtKB/Swiss-Prot:Q0J3L4

    Gene LinkOut

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