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    LOC4346983 uncharacterized LOC4346983 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4346983, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4346983
    Gene description
    uncharacterized LOC4346983
    Locus tag
    OSNPB_090397700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1655_B12.20
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    Genomic context

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    See LOC4346983 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (18256386..18259151, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (13887335..13890112, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 Neighboring gene protein trichome birefringence-like 14 Neighboring gene cleavage and polyadenylation specificity factor subunit 3-II Neighboring gene uncharacterized LOC107276879 Neighboring gene uncharacterized LOC136351887

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbon-sulfur lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4346983
    Names
    Os09g0397700
    centromere protein V
    putative nuclear protein p30

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      18256386..18259151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015795815.2 → XP_015651301.1  uncharacterized protein LOC4346983

      UniProtKB/TrEMBL
      Q0J223, Q6ERD5
      Conserved Domains (1) summary
      COG3791
      Location:11 → 123
      COG3791; Uncharacterized conserved protein [Function unknown]

    2. XM_015795816.3 → XP_015651302.1  uncharacterized protein LOC4346983

      UniProtKB/TrEMBL
      Q0J223, Q6ERD5
      Conserved Domains (1) summary
      COG3791
      Location:11 → 123
      COG3791; Uncharacterized conserved protein [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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