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    LOC4347552 DNA repair RAD52-like protein 2, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347552, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4347552
    Gene description
    DNA repair RAD52-like protein 2, chloroplastic
    Locus tag
    OSNPB_090512800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0450E05.1
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    Genomic context

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    See LOC4347552 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (24362027..24365185)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (19950709..19953958)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107275390 Neighboring gene hsp70 nucleotide exchange factor FES1 Neighboring gene UPF0664 stress-induced protein C29B12.11c Neighboring gene ankyrin repeat domain-containing protein 2B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA repair RAD52-like protein 2, chloroplastic
    Names
    Os09g0512800

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      24362027..24365185
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756893.2 → XP_015612379.1  DNA repair RAD52-like protein 2, chloroplastic

      UniProtKB/TrEMBL
      A0A0P0XQ11, B8BDI1, Q69IP1
    Nucleotide Protein
    Heading Accession and Version

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