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    LOC4324297 glycine-rich RNA-binding protein 2, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324297, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4324297
    Gene description
    glycine-rich RNA-binding protein 2, mitochondrial
    Locus tag
    OSNPB_010974701
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4324297 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (43724363..43726003)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (43071387..43072514)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase XBOS31 Neighboring gene pectin acetylesterase 5 Neighboring gene soluble inorganic pyrophosphatase 4 Neighboring gene uncharacterized LOC112935997 Neighboring gene protein SOSEKI 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycine-rich RNA-binding protein 2, mitochondrial
    Names
    Os01g0974701
    P0459B04.11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      43724363..43726003
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015757044.3 → XP_015612530.1  glycine-rich RNA-binding protein 2, mitochondrial

      UniProtKB/TrEMBL
      A0A5S6RC18, A0A8J8YLB0, B7F8B0, B9EX05, Q0JFK8
      Conserved Domains (1) summary
      cl17169
      Location:38 → 113
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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